ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1P8AV46_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1P8AV46_F1_nD2

A0A1P8AV46_F1_nD2

UID: 003805117

AlphaFold

Range: 396-505
AlphaFold: AF-A0A1P8AV46
UniProt: A0A1P8AV46 (all domains)
Gene: At1g09880

Protein: rhamnogalacturonan endolyase (EC 4.2.2.23)

3D Structure

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Related Domains

Browse other domains in fn3_3 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupPrealbumin-like(11.1.4)

FFamilyfn3_3(11.1.4.27)

Pfam Families

Polysaccharide lyase family 4, domain II

ClanCL0287Transthyretin

External Links

AlphaFold DB: A0A1P8AV46 UniProt: A0A1P8AV46

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 396-505