ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9M9H4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9M9H4_F1_nD2

Q9M9H4_F1_nD2

UID: 003805183

AlphaFold

Range: 266-355
AlphaFold: AF-Q9M9H4
UniProt: Q9M9H4 (all domains)
Gene: PDE338

Protein: Protein PIGMENT DEFECTIVE 338, chloroplastic (Protein PETB/PETD STABILIZING FACTOR) (Protein PHOTOSYSTEM BIOGENESIS REGULATOR 1) (Protein rbcL RNA S1-binding domain)

3D Structure

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Related Domains

Browse other domains in S1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyS1(2.1.1.7)

Pfam Families

S1 RNA binding domain

ClanCL0021OB

External Links

AlphaFold DB: Q9M9H4 UniProt: Q9M9H4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 266-355