ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A1P8B5A1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1P8B5A1_F1_nD2

A0A1P8B5A1_F1_nD2

UID: 003805223

AlphaFold

Range: 66-225
AlphaFold: AF-A0A1P8B5A1
UniProt: A0A1P8B5A1 (all domains)
Gene: At4g09300

Protein: LisH and RanBPM domains containing protein

3D Structure

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Related Domains

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Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupHelical domain in TOPLESS related protein 2 (TPR2)(109.46)

TT-groupHelical domain in TOPLESS related protein 2 (TPR2)(109.46.1)

FFamilyCTLH(109.46.1.1)

Pfam Families

CTLH/CRA C-terminal to LisH motif domain

ClanCL0825CTLH

External Links

AlphaFold DB: A0A1P8B5A1 UniProt: A0A1P8B5A1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-225