ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4HPZ9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/F4HPZ9_F1_nD1

F4HPZ9_F1_nD1

UID: 003805869

AlphaFold

Range: 26-205,356-410
AlphaFold: AF-F4HPZ9
UniProt: F4HPZ9 (all domains)
Gene: LIG6

Protein: DNA ligase 6 (AtLIG6) (DNA ligase VI) (EC 6.5.1.1) (Ligase 1)

3D Structure

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Related Domains

Browse other domains in DRMBL →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyDRMBL(247.1.1.9)

Pfam Families

DNA repair metallo-beta-lactamase

ClanCL0398RMMBL_DRMBL

External Links

AlphaFold DB: F4HPZ9 UniProt: F4HPZ9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-205,356-410