ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LY56_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9LY56_F1_nD1

Q9LY56_F1_nD1

UID: 003806636

AlphaFold

Range: 6-110
AlphaFold: AF-Q9LY56
UniProt: Q9LY56 (all domains)
Gene: At3g55890

Protein: Protein yippee-like At3g55890

3D Structure

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Related Domains

Browse other domains in Yippee-Mis18 →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupETN0001 domain-like(708)

HH-groupETN0001 domain-like(708.1)

TT-groupMss4-like(708.1.2)

FFamilyYippee-Mis18(708.1.2.3)

Pfam Families

PF03226Yippee-Mis18

Yippee zinc-binding/DNA-binding /Mis18, centromere assembly

ClanCL0080Beta-tent

External Links

AlphaFold DB: Q9LY56 UniProt: Q9LY56

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-110