ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4ITM1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/F4ITM1_F1_nD1

F4ITM1_F1_nD1

UID: 003806980

AlphaFold

Range: 11-150
AlphaFold: AF-F4ITM1
UniProt: F4ITM1 (all domains)
Gene: RSL1

Protein: E3 ubiquitin-protein ligase RSL1 (EC 2.3.2.31) (Protein RING FINGER OF SEED LONGEVITY 1) (RING-type E3 ubiquitin transferase RSL1)

3D Structure

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Related Domains

Browse other domains in RVT_3 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRVT_3(2484.1.1.67)

Pfam Families

Reverse transcriptase-like

ClanCL0219RNase_H

External Links

AlphaFold DB: F4ITM1 UniProt: F4ITM1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-150