ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4JSW8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/F4JSW8_F1_nD1

F4JSW8_F1_nD1

UID: 003807161

AlphaFold

Range: 41-365
AlphaFold: AF-F4JSW8
UniProt: F4JSW8 (all domains)
Gene: At4g38030

Protein: rhamnogalacturonan endolyase (EC 4.2.2.23)

3D Structure

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Related Domains

Browse other domains in Rhamnogal_lyase →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupsupersandwich(12.3)

TT-groupsupersandwich(12.3.1)

FFamilyRhamnogal_lyase(12.3.1.38)

Pfam Families

PF06045Rhamnogal_lyase

Rhamnogalacturonate lyase family

ClanCL0103Gal_mutarotase

External Links

AlphaFold DB: F4JSW8 UniProt: F4JSW8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-365