ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LQV2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9LQV2_F1_nD2

Q9LQV2_F1_nD2

UID: 003808297

AlphaFold

Range: 91-180,206-255
AlphaFold: AF-Q9LQV2
UniProt: Q9LQV2 (all domains)
Gene: RDR1

Protein: RNA-dependent RNA polymerase 1 (AtRDRP1) (EC 2.7.7.48) (RNA-directed RNA polymerase 1)

3D Structure

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Related Domains

Browse other domains in PH_RDR2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPH domain-like(220)

HH-groupPH domain-like(220.1)

TT-groupPH domain-like(220.1.1)

FFamilyPH_RDR2(220.1.1.183)

Pfam Families

PF24823PH_RDR2

RDR2 PH-like domain

ClanCL0266PH

External Links

AlphaFold DB: Q9LQV2 UniProt: Q9LQV2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 91-180,206-255