ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LQV2_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/Q9LQV2_F1_nD6

Q9LQV2_F1_nD6

UID: 003808299

AlphaFold

Range: 611-705,821-1090
AlphaFold: AF-Q9LQV2
UniProt: Q9LQV2 (all domains)
Gene: RDR1

Protein: RNA-dependent RNA polymerase 1 (AtRDRP1) (EC 2.7.7.48) (RNA-directed RNA polymerase 1)

3D Structure

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Related Domains

Browse other domains in RdRP, RdRP_head →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupRNAi polymerase helical domain(3588)

HH-groupRNAi polymerase helical domain(3588.1)

TT-groupRNAi polymerase helical domain(3588.1.1)

FFamilyRdRP, RdRP_head(3588.1.1.2)

Pfam Families

RNA dependent RNA polymerase

PF26253RdRP_head

RdRP, head domain

External Links

AlphaFold DB: Q9LQV2 UniProt: Q9LQV2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 611-705,821-1090