ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LQV2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9LQV2_F1_nD1

Q9LQV2_F1_nD1

UID: 003808300

AlphaFold

Range: 1-85
AlphaFold: AF-Q9LQV2
UniProt: Q9LQV2 (all domains)
Gene: RDR1

Protein: RNA-dependent RNA polymerase 1 (AtRDRP1) (EC 2.7.7.48) (RNA-directed RNA polymerase 1)

3D Structure

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Related Domains

Browse other domains in RRM_RdRP1_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_RdRP1_2(304.9.1.96)

Pfam Families

PF26250RRM_RdRP1_2

RdRP1/2, RRM domain

ClanCL0221RRM

External Links

AlphaFold DB: Q9LQV2 UniProt: Q9LQV2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-85