ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9LQM5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9LQM5_F1_nD3

Q9LQM5_F1_nD3

UID: 003808540

AlphaFold

Range: 461-610
AlphaFold: AF-Q9LQM5
UniProt: Q9LQM5 (all domains)
Gene: NHL8

Protein: RBR-type E3 ubiquitin transferase (EC 2.3.2.31)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rcat_RNF216 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupIBR domain(376.1.6)

FFamilyRcat_RNF216(376.1.6.9)

Pfam Families

PF26200Rcat_RNF216

RNF216 Rcat domain

ClanCL0229RING

External Links

AlphaFold DB: Q9LQM5 UniProt: Q9LQM5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 461-610