ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4JGZ1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F4JGZ1_F1_nD2

F4JGZ1_F1_nD2

UID: 003808673

RepresentativeAlphaFold

Range: 736-840,936-970,1031-1065,1091-1110
AlphaFold: AF-F4JGZ1
UniProt: F4JGZ1 (all domains)
Gene: MED16

Protein: Mediator of RNA polymerase II transcription subunit 16 (Protein SENSITIVE TO FREEZING 6)

3D Structure

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Related Domains

Browse other domains in MED16_helical →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSpectrin repeat-like(604)

HH-groupBAG domain(604.3)

TT-groupBAG domain(604.3.1)

FFamilyMED16_helical(604.3.1.36)

Pfam Families

PF30926MED16_helical

Mediator complex subunit 16 helical domain

External Links

AlphaFold DB: F4JGZ1 UniProt: F4JGZ1

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 736-840,936-970,1031-1065,1091-1110