ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9FJR0_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q9FJR0_F1_nD4

Q9FJR0_F1_nD4

UID: 003808710

AlphaFold

Range: 721-935
AlphaFold: AF-Q9FJR0
UniProt: Q9FJR0 (all domains)
Gene: UPF1

Protein: Regulator of nonsense transcripts 1 homolog (EC 3.6.4.12) (EC 3.6.4.13) (ATP-dependent helicase UPF1)

3D Structure

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Related Domains

Browse other domains in AAA_12 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_12(2004.1.1.186)

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q9FJR0 UniProt: Q9FJR0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 721-935