ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LFC5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9LFC5_F1_nD3

Q9LFC5_F1_nD3

UID: 003808965

AlphaFold

Range: 511-725
AlphaFold: AF-Q9LFC5
UniProt: Q9LFC5 (all domains)
Gene: At5g01110

Protein: Pentatricopeptide repeat-containing protein At5g01110

3D Structure

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Related Domains

Browse other domains in PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR_1, PPR_2, PPR_3, PPR_long, TPR_24(109.4.1.1519)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat domain

ClanCL0020TPR

PF17177PPR_long

Pentacotripeptide-repeat region of PRORP

ClanCL0020TPR

External Links

AlphaFold DB: Q9LFC5 UniProt: Q9LFC5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 511-725

Pentatricopeptide repeat-containing protein

ClanCL0020TPR