ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q84L33_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q84L33_F1_nD1

Q84L33_F1_nD1

UID: 003809007

AlphaFold

Range: 1-75
AlphaFold: AF-Q84L33
UniProt: Q84L33 (all domains)
Gene: RAD23B

Protein: Ubiquitin receptor RAD23b (AtRAD23b) (Putative DNA repair protein RAD23-1) (RAD23-like protein 1) (AtRAD23-1)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyubiquitin(221.1.1.2)

Pfam Families

PF00240ubiquitin

Ubiquitin family

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q84L33 UniProt: Q84L33

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-75