ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8LE47_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8LE47_F1_nD1

Q8LE47_F1_nD1

UID: 003809667

RepresentativeAlphaFold

Range: 16-405
AlphaFold: AF-Q8LE47
UniProt: Q8LE47 (all domains)
Gene: PPR336

Protein: Small ribosomal subunit protein mS86 (rPPR1) (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial) (Protein PENTATRICOPEPTIDE REPEAT 336)

3D Structure

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Related Domains

Browse other domains in PPR, PPR_2, PPR_3 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_2, PPR_3(109.4.1.1256)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat domain

ClanCL0020TPR

External Links

AlphaFold DB: Q8LE47 UniProt: Q8LE47

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-405