ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LVK6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9LVK6_F1_nD1

Q9LVK6_F1_nD1

UID: 003809675

AlphaFold

Range: 46-165
AlphaFold: AF-Q9LVK6
UniProt: Q9LVK6 (all domains)
Gene: At3g13940

Protein: DNA binding / DNA-directed RNA polymerase

3D Structure

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Related Domains

Browse other domains in RNA_pol_I_A49 →

Classification

AArchitecturebeta complex topology(a.5)

XX-grouptriple barrel(59)

HH-grouptriple barrel(59.1)

TT-groupRNA polymerase I subunits A49/A34.5 dimerization domains(59.1.3)

FFamilyRNA_pol_I_A49(59.1.3.1)

Pfam Families

PF06870RNA_pol_I_A49

A49-like RNA polymerase I associated factor

ClanCL0662Triple_barrel

External Links

AlphaFold DB: Q9LVK6 UniProt: Q9LVK6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-165