ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ir2B1 - ECOD Domain | ECOD

ECOD/Domains/e3ir2B1

e3ir2B1

UID: 000381047

PDB

Range: B:195-381
PDB: 3IR2 chain B(all domains)
UniProt: Q9HC16 (all domains)
Gene: APOBEC3G

Molecule: DNA dC->dU-editing enzyme APOBEC-3G

3D Structure

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Related Domains

Browse other domains in NAD2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilyNAD2(2492.1.1.23)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal
Zinc ionZN

Pfam Families

PF18782APOBEC3

APOBEC3, cytosine deaminase domain

ClanCL0109CDA

External Links

ECOD PDB View: 3IR2 RCSB PDB: 3IR2 PDBe: 3IR2 UniProt: Q9HC16

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.