ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

F4I1P7_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/F4I1P7_F1_nD1

F4I1P7_F1_nD1

UID: 003811133

AlphaFold

Range: 41-280
AlphaFold: AF-F4I1P7
UniProt: F4I1P7 (all domains)
Gene: At1g49250

Protein: DNA ligase (EC 6.5.1.1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_ligase_A_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupATP-dependent DNA ligase DNA-binding domain(4095)

HH-groupATP-dependent DNA ligase DNA-binding domain(4095.1)

TT-groupATP-dependent DNA ligase DNA-binding domain(4095.1.1)

FFamilyDNA_ligase_A_N(4095.1.1.1)

Pfam Families

PF04675DNA_ligase_A_N

DNA ligase N terminus

External Links

AlphaFold DB: F4I1P7 UniProt: F4I1P7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-280