ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9XIL5_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q9XIL5_F1_nD4

Q9XIL5_F1_nD4

UID: 003811260

AlphaFold

Range: 621-720
AlphaFold: AF-Q9XIL5
UniProt: Q9XIL5 (all domains)
Gene: OTP51

Protein: Pentatricopeptide repeat-containing protein At2g15820, chloroplastic (Protein ORGANELLE TRANSCRIPT PROCESSING 51) (AtOTP51)

3D Structure

Loading viewer...

Related Domains

Browse other domains in LAGLIDADG_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHoming endonucleases-like(242)

HH-groupHoming endonucleases(242.1)

TT-groupHoming endonucleases(242.1.1)

FFamilyLAGLIDADG_2(242.1.1.2)

Pfam Families

PF03161LAGLIDADG_2

LAGLIDADG DNA endonuclease family

ClanCL0324Homing_endonuc

External Links

AlphaFold DB: Q9XIL5 UniProt: Q9XIL5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 621-720