ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LQZ4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9LQZ4_F1_nD2

Q9LQZ4_F1_nD2

UID: 003811462

AlphaFold

Range: 191-250
AlphaFold: AF-Q9LQZ4
UniProt: Q9LQZ4 (all domains)
Gene: At1g75510

Protein: At1g75700 (F10A5.27) (Putative transcription initiation factor) (TFIIF-beta 2) (Transcription initiation factor IIF, beta subunit)

3D Structure

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Related Domains

Browse other domains in TFIIF_beta →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyTFIIF_beta(101.1.2.35)

Pfam Families

PF02270TFIIF_beta

TFIIF, beta subunit HTH domain

ClanCL0123HTH

External Links

AlphaFold DB: Q9LQZ4 UniProt: Q9LQZ4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 191-250