ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q94HW2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q94HW2_F1_nD1

Q94HW2_F1_nD1

UID: 003812215

AlphaFold

Range: 16-50,76-120
UniProt: Q94HW2 (all domains)
Gene: RE1

Protein: Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]

3D Structure

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Related Domains

Browse other domains in Retrotran_gag_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyRetrotran_gag_2(170.2.1.13)

Pfam Families

PF14223Retrotran_gag_2

gag-polypeptide of LTR copia-type

ClanCL0523GAG-polyprotein

External Links

UniProt: Q94HW2

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