ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LYH2_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9LYH2_F1_nD3

Q9LYH2_F1_nD3

UID: 003812563

AlphaFold

Range: 261-435,481-490
AlphaFold: AF-Q9LYH2
UniProt: Q9LYH2 (all domains)
Gene: At5g12010

Protein: AT5g12010/F14F18_180 (Nuclease)

3D Structure

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Related Domains

Browse other domains in DDE_Tnp_4 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDDE_Tnp_4(2484.1.1.120)

Pfam Families

PF13359DDE_Tnp_4

DDE superfamily endonuclease

ClanCL0219RNase_H

External Links

AlphaFold DB: Q9LYH2 UniProt: Q9LYH2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 261-435,481-490