ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9SHL7_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9SHL7_F1_nD3

Q9SHL7_F1_nD3

UID: 003812935

AlphaFold

Range: 351-440
AlphaFold: AF-Q9SHL7
UniProt: Q9SHL7 (all domains)
Gene: RRP44A

Protein: Exosome complex exonuclease RRP44 homolog A (RRP44 homolog A) (EC 3.1.13.-) (EC 3.1.26.-) (Protein EMBRYO DEFECTIVE 2763) (Ribosomal RNA-processing protein 44A) (AtRRP44A)

3D Structure

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Related Domains

Browse other domains in OB_Dis3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyOB_Dis3(2.1.1.86)

Pfam Families

PF17849OB_Dis3

Dis3-like cold-shock domain 2 (CSD2)

ClanCL0021OB

External Links

AlphaFold DB: Q9SHL7 UniProt: Q9SHL7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 351-440