ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9SHL7_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q9SHL7_F1_nD5

Q9SHL7_F1_nD5

UID: 003812944

AlphaFold

Range: 846-933
AlphaFold: AF-Q9SHL7
UniProt: Q9SHL7 (all domains)
Gene: RRP44A

Protein: Exosome complex exonuclease RRP44 homolog A (RRP44 homolog A) (EC 3.1.13.-) (EC 3.1.26.-) (Protein EMBRYO DEFECTIVE 2763) (Ribosomal RNA-processing protein 44A) (AtRRP44A)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rrp44_S1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRrp44_S1(2.1.1.81)

Pfam Families

PF17215Rrp44_S1

S1 domain

ClanCL0021OB

External Links

AlphaFold DB: Q9SHL7 UniProt: Q9SHL7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 846-933