ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8GUP2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8GUP2_F1_nD1

Q8GUP2_F1_nD1

UID: 003813289

AlphaFold

Range: 71-274
AlphaFold: AF-Q8GUP2
UniProt: Q8GUP2 (all domains)
Gene: At1g16445

Protein: tRNA (mnm(5)s(2)U34)-methyltransferase, chloroplastic (EC 2.1.1.61) (5-aminomethyl-2-thiouridine methyltransferase) (MnmC-like methyltransferase) (atMnmM)

3D Structure

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Related Domains

Browse other domains in rRNA_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyrRNA_methylase(2003.1.5.59)

Pfam Families

PF06962rRNA_methylase

Putative rRNA methylase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q8GUP2 UniProt: Q8GUP2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 71-274