ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4K0C4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F4K0C4_F1_nD2

F4K0C4_F1_nD2

UID: 003813329

AlphaFold

Range: 1-15,206-400,421-440,461-475,531-565
AlphaFold: AF-F4K0C4
UniProt: F4K0C4 (all domains)
Gene: TRS130

Protein: Trafficking protein particle complex II-specific subunit 130 homolog (AtTRS130) (TRAPP II-specific subunit 130 homolog)

3D Structure

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Related Domains

Browse other domains in TRAPPC10-Trs130_NTS →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTRAPPC10-Trs130_NTS(109.4.1.1411)

Pfam Families

PF30303TRAPPC10-Trs130_NTS

TRAPPC10/Trs130, NTS-like domain

ClanCL0020TPR

External Links

AlphaFold DB: F4K0C4 UniProt: F4K0C4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-15,206-400,421-440,461-475,531-565