ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A8MS85_F1_nD7 - ECOD Domain | ECOD

ECOD/Domains/A8MS85_F1_nD7

A8MS85_F1_nD7

UID: 003814160

AlphaFold

Range: 1086-1190
AlphaFold: AF-A8MS85
UniProt: A8MS85 (all domains)
Gene: SPT6

Protein: Transcription elongation factor SPT6 homolog (AtSPT6)

3D Structure

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Related Domains

Browse other domains in Spt6_S1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilySpt6_S1(2.1.1.116)

Pfam Families

PF21710Spt6_S1

Spt6, S1/OB domain

ClanCL0021OB

External Links

AlphaFold DB: A8MS85 UniProt: A8MS85

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1086-1190