ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9ZUM8_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q9ZUM8_F1_nD5

Q9ZUM8_F1_nD5

UID: 003814716

AlphaFold

Range: 266-315
AlphaFold: AF-Q9ZUM8
UniProt: Q9ZUM8 (all domains)
Gene: At2g19650

Protein: Cysteine/Histidine-rich C1 domain family protein (Putative Ta11-like non-LTR retroelement protein)

3D Structure

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Related Domains

Browse other domains in C1_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupCysteine-rich domain(376.1.2)

FFamilyC1_2(376.1.2.2)

Pfam Families

C1 domain

ClanCL0229RING

External Links

AlphaFold DB: Q9ZUM8 UniProt: Q9ZUM8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 266-315