ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9SG02_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q9SG02_F1_nD5

Q9SG02_F1_nD5

UID: 003814811

AlphaFold

Range: 761-885
AlphaFold: AF-Q9SG02
UniProt: Q9SG02 (all domains)
Gene: RDR6

Protein: RNA-dependent RNA polymerase 6 (AtRDRP6) (EC 2.7.7.48) (Protein SILENCING DEFECTIVE 1) (Protein SUPPRESSOR OF GENE SILENCING 2) (RNA-directed RNA polymerase 6)

3D Structure

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Related Domains

Browse other domains in RdRP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyRdRP(1.1.2.11)

Pfam Families

RNA dependent RNA polymerase

External Links

AlphaFold DB: Q9SG02 UniProt: Q9SG02

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 761-885