ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q93Y16_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q93Y16_F1_nD3

Q93Y16_F1_nD3

UID: 003815097

AlphaFold

Range: 361-555
AlphaFold: AF-Q93Y16
UniProt: Q93Y16 (all domains)
Gene: At1g27900

Protein: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 (EC 3.6.4.13) (DEAH RNA helicase homolog PRP22)

3D Structure

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Related Domains

Browse other domains in HA2_N,HA2_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSec63 N-terminal subdomain-like(4156)

HH-groupSec63 N-terminal subdomain-like(4156.1)

TT-groupSec63 N-terminal subdomain-like(4156.1.1)

FFamilyHA2_N,HA2_C(4156.1.1.2)

Pfam Families

PF04408WHD_HA2

Helicase associated domain (HA2), winged-helix

ClanCL0123HTH

Helicase associated domain (HA2), ratchet-like

External Links

AlphaFold DB: Q93Y16 UniProt: Q93Y16

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 361-555