ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q39249_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q39249_F1_nD2

Q39249_F1_nD2

UID: 003815493

AlphaFold

Range: 191-375
AlphaFold: AF-Q39249
UniProt: Q39249 (all domains)
Gene: VDE1

Protein: Violaxanthin de-epoxidase, chloroplastic (AtVxDE) (EC 1.23.5.1) (Protein NON-PHOTOCHEMICAL QUENCHING 1)

3D Structure

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Related Domains

Browse other domains in VDE →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyVDE(9.1.1.10)

Pfam Families

VDE lipocalin domain

ClanCL0116Calycin

External Links

AlphaFold DB: Q39249 UniProt: Q39249

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 191-375