ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LIH5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9LIH5_F1_nD2

Q9LIH5_F1_nD2

UID: 003815563

AlphaFold

Range: 591-675
AlphaFold: AF-Q9LIH5
UniProt: Q9LIH5 (all domains)
Gene: At3g18640

Protein: Zinc finger CCCH domain-containing protein 38 (AtC3H38)

3D Structure

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Related Domains

Browse other domains in SCAF11-like_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSigma2 domain-like(142)

HH-groupSigma2 domain of RNA polymerase sigma factors(142.1)

TT-groupSigma2 domain of RNA polymerase sigma factors(142.1.1)

FFamilySCAF11-like_C(142.1.1.22)

Pfam Families

PF23030SCAF11-like_C

SCAF11-like, C-terminal domain

ClanCL0916SRI

External Links

AlphaFold DB: Q9LIH5 UniProt: Q9LIH5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 591-675