ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5XVC2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5XVC2_F1_nD2

Q5XVC2_F1_nD2

UID: 003815854

AlphaFold

Range: 41-90,221-345,596-625,681-705
AlphaFold: AF-Q5XVC2
UniProt: Q5XVC2 (all domains)
Gene: At3g04820

Protein: Pseudouridine synthase family protein

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyTruD(304.102.1.2)

Pfam Families

tRNA pseudouridine synthase D (TruD)

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: Q5XVC2 UniProt: Q5XVC2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-90,221-345,596-625,681-705