ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4KCC2_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/F4KCC2_F1_nD3

F4KCC2_F1_nD3

UID: 003816190

AlphaFold

Range: 866-955
AlphaFold: AF-F4KCC2
UniProt: F4KCC2 (all domains)
Gene: PRT6

Protein: E3 ubiquitin-protein ligase PRT6 (EC 2.3.2.27) (Protein GREENING AFTER EXTENDED DARKNESS 1) (Protein PROTEOLYSIS 6) (RING-type E3 ubiquitin transferase PRT6)

3D Structure

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Related Domains

Browse other domains in UBR1-like_wing →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyUBR1-like_wing(101.1.2.381)

Pfam Families

PF22960WHD_UBR1

E3 ubiquitin-protein ligase UBR1-like, winged-helix domain

ClanCL0123HTH

External Links

AlphaFold DB: F4KCC2 UniProt: F4KCC2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 866-955