ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4KCC2_F1_nD7 - ECOD Domain | ECOD

ECOD/Domains/F4KCC2_F1_nD7

F4KCC2_F1_nD7

UID: 003816191

AlphaFold

Range: 1861-2000
AlphaFold: AF-F4KCC2
UniProt: F4KCC2 (all domains)
Gene: PRT6

Protein: E3 ubiquitin-protein ligase PRT6 (EC 2.3.2.27) (Protein GREENING AFTER EXTENDED DARKNESS 1) (Protein PROTEOLYSIS 6) (RING-type E3 ubiquitin transferase PRT6)

3D Structure

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Related Domains

Browse other domains in PRT6_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyPRT6_C(376.1.1.43)

Pfam Families

Proteolysis_6 C-terminal

External Links

AlphaFold DB: F4KCC2 UniProt: F4KCC2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1861-2000