ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8VZJ5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8VZJ5_F1_nD1

Q8VZJ5_F1_nD1

UID: 003816196

AlphaFold

Range: 66-170,211-228,251-305
AlphaFold: AF-Q8VZJ5
UniProt: Q8VZJ5 (all domains)
Gene: At5g23575

Protein: AT5g08500/MAH20_6 (Transmembrane CLPTM1 family protein)

3D Structure

Loading viewer...

Related Domains

Browse other domains in CLPTM1 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupCupredoxin-like(3156)

HH-groupCupredoxin-related(3156.1)

TT-groupCupredoxin-related(3156.1.1)

FFamilyCLPTM1(3156.1.1.18)

Pfam Families

Cleft lip and palate transmembrane protein 1 (CLPTM1)

External Links

AlphaFold DB: Q8VZJ5 UniProt: Q8VZJ5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-170,211-228,251-305