ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4IWM0_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/F4IWM0_F1_nD4

F4IWM0_F1_nD4

UID: 003816298

AlphaFold

Range: 486-569
AlphaFold: AF-F4IWM0
UniProt: F4IWM0 (all domains)
Gene: At3g42723

Protein: ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein

3D Structure

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Related Domains

Browse other domains in RVP_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyRVP_2(1.1.1.17)

Pfam Families

Retroviral aspartyl protease

ClanCL0129Peptidase_AA

External Links

AlphaFold DB: F4IWM0 UniProt: F4IWM0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 486-569