ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4JRX3_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/F4JRX3_F1_nD5

F4JRX3_F1_nD5

UID: 003816314

AlphaFold

Range: 1081-1135
AlphaFold: AF-F4JRX3
UniProt: F4JRX3 (all domains)
Gene: At4g31210

Protein: DNA topoisomerase (EC 5.6.2.1)

3D Structure

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Related Domains

Browse other domains in zf-C4_Topoisom →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupMycobacterium tuberculosis Topoisomerase I C-terminal domain(375.13)

TT-groupMycobacterium tuberculosis Topoisomerase I C-terminal domain(375.13.1)

FFamilyzf-C4_Topoisom(375.13.1.2)

Pfam Families

PF01396Zn_ribbon_Top1

Topoisomerase DNA binding C4 zinc finger

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: F4JRX3 UniProt: F4JRX3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1081-1135