ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O24600_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/O24600_F1_nD6

O24600_F1_nD6

UID: 003817087

AlphaFold

Range: 686-710,896-955,976-993
AlphaFold: AF-O24600
UniProt: O24600 (all domains)
Gene: RPOT3

Protein: DNA-directed RNA polymerase 3, chloroplastic (EC 2.7.7.6) (Protein SCABRA 3)

3D Structure

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Related Domains

Browse other domains in RNA_pol →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRNA_pol(304.48.1.11)

Pfam Families

PF00940RNA_pol

DNA-dependent RNA polymerase

External Links

AlphaFold DB: O24600 UniProt: O24600

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 686-710,896-955,976-993