ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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F4J5L3_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/F4J5L3_F1_nD3

F4J5L3_F1_nD3

UID: 003817326

AlphaFold

Range: 236-305
AlphaFold: AF-F4J5L3
UniProt: F4J5L3 (all domains)
Gene: RFA6

Protein: RBR-type E3 ubiquitin transferase (EC 2.3.2.31)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupAriadne-1 protein homolog(376.1.4)

FFamilyIBR(376.1.4.1)

Pfam Families

IBR domain, a half RING-finger domain

ClanCL0229RING

External Links

AlphaFold DB: F4J5L3 UniProt: F4J5L3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 236-305