ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A1P8AQ71_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A1P8AQ71_F1_nD3

A0A1P8AQ71_F1_nD3

UID: 003817646

AlphaFold

Range: 461-655
AlphaFold: AF-A0A1P8AQ71
UniProt: A0A1P8AQ71 (all domains)
Gene: At1g09890

Protein: rhamnogalacturonan endolyase (EC 4.2.2.23)

3D Structure

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Related Domains

Browse other domains in CBM-like →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyCBM-like(10.32.1.44)

Pfam Families

PF14683CBM-like

Polysaccharide lyase family 4, domain III

ClanCL0202GBD

External Links

AlphaFold DB: A0A1P8AQ71 UniProt: A0A1P8AQ71

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 461-655