ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8L5Y0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8L5Y0_F1_nD2

Q8L5Y0_F1_nD2

UID: 003818345

AlphaFold

Range: 296-380,431-615
AlphaFold: AF-Q8L5Y0
UniProt: Q8L5Y0 (all domains)
Gene: VPS39

Protein: Vacuolar sorting protein 39 (Protein EMBRYO DEFECTIVE 2754)

3D Structure

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Related Domains

Browse other domains in Vps39_1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps39_1(109.4.1.308)

Pfam Families

PF10366Vps39_1

Vacuolar sorting protein 39 domain 1

ClanCL0020TPR

External Links

AlphaFold DB: Q8L5Y0 UniProt: Q8L5Y0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 296-380,431-615