ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9FMA3_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/Q9FMA3_F1_nD6

Q9FMA3_F1_nD6

UID: 003819949

AlphaFold

Range: 406-725
AlphaFold: AF-Q9FMA3
UniProt: Q9FMA3 (all domains)
Gene: PEX5

Protein: Peroxisome biogenesis protein 5 (Peroxin-5) (AtPEX5) (Peroxisomal targeting signal type 1 receptor) (Pex5p)

3D Structure

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Related Domains

Browse other domains in TPR_1, TPR_11, TPR_16 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_1, TPR_11, TPR_16(109.4.1.1441)

Pfam Families

Tetratricopeptide repeat

ClanCL0020TPR

TPR repeat

ClanCL0020TPR

Tetratricopeptide repeat

ClanCL0020TPR

External Links

AlphaFold DB: Q9FMA3 UniProt: Q9FMA3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 406-725