ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O80897_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O80897_F1_nD2

O80897_F1_nD2

UID: 003820006

AlphaFold

Range: 101-220
AlphaFold: AF-O80897
UniProt: O80897 (all domains)
Gene: At2g32600

Protein: At2g32600/T26B15.16 (Hydroxyproline-rich glycoprotein family protein) (Putative spliceosome associated protein)

3D Structure

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Related Domains

Browse other domains in SF3A2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupHSP20-like(319)

HH-groupPre-mRNA-splicing factor PRP11 C-terminal domain(319.2)

TT-groupPre-mRNA-splicing factor PRP11 C-terminal domain(319.2.1)

FFamilySF3A2(319.2.1.1)

Pfam Families

Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)

External Links

AlphaFold DB: O80897 UniProt: O80897

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 101-220