ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4JP48_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F4JP48_F1_nD2

F4JP48_F1_nD2

UID: 003820482

AlphaFold

Range: 166-500
AlphaFold: AF-F4JP48
UniProt: F4JP48 (all domains)
Gene: MSH4

Protein: DNA mismatch repair protein MSH4 (AtMSH4) (MutS protein homolog 4)

3D Structure

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Related Domains

Browse other domains in MutS_IV, MutS_III →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupDNA repair protein MutS, domain III(601.23)

TT-groupDNA repair protein MutS, domain III(601.23.1)

FFamilyMutS_IV, MutS_III(601.23.1.4)

Pfam Families

PF05190MutS_IV

MutS family domain IV

PF05192MutS_III

MutS domain III

External Links

AlphaFold DB: F4JP48 UniProt: F4JP48

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 166-500