ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8H0V1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8H0V1_F1_nD2

Q8H0V1_F1_nD2

UID: 003820511

AlphaFold

Range: 286-540
AlphaFold: AF-Q8H0V1
UniProt: Q8H0V1 (all domains)
Gene: At4g36390

Protein: CDK5RAP1-like protein

3D Structure

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Related Domains

Browse other domains in Radical_SAM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM(2002.1.1.120)

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

External Links

AlphaFold DB: Q8H0V1 UniProt: Q8H0V1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 286-540