ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4J3Q1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/F4J3Q1_F1_nD3

F4J3Q1_F1_nD3

UID: 003820512

AlphaFold

Range: 421-565
AlphaFold: AF-F4J3Q1
UniProt: F4J3Q1 (all domains)
Gene: At3g04480

Protein: Diphthine--ammonia ligase (EC 6.3.1.14) (Diphthamide synthase) (Diphthamide synthetase)

3D Structure

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Related Domains

Browse other domains in Ribonuc_L-PSP →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupYjgF-like(301.7)

TT-groupYjgF-like(301.7.1)

FFamilyRibonuc_L-PSP(301.7.1.1)

Pfam Families

PF01042Ribonuc_L-PSP

Endoribonuclease L-PSP

ClanCL0534YjgF-like

External Links

AlphaFold DB: F4J3Q1 UniProt: F4J3Q1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 421-565