ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9LZD9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9LZD9_F1_nD2

Q9LZD9_F1_nD2

UID: 003820701

AlphaFold

Range: 111-195
AlphaFold: AF-Q9LZD9
UniProt: Q9LZD9 (all domains)
Gene: At5g03480

Protein: RNA-binding (RRM/RBD/RNP motifs) family protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Nup35_RRM_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyNup35_RRM_2(304.9.1.58)

Pfam Families

PF14605Nup35_RRM_2

Nup53/35/40-type RNA recognition motif

ClanCL0221RRM

External Links

AlphaFold DB: Q9LZD9 UniProt: Q9LZD9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 111-195