ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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F4JXV3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F4JXV3_F1_nD2

F4JXV3_F1_nD2

UID: 003821098

AlphaFold

Range: 541-690
AlphaFold: AF-F4JXV3
UniProt: F4JXV3 (all domains)
Gene: At5g11430

Protein: SPOC domain / Transcription elongation factor S-II protein

3D Structure

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Related Domains

Browse other domains in SPOC →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSPOC domain-like(60)

HH-groupSPOC domain-related(60.1)

TT-groupSPOC domain(60.1.1)

FFamilySPOC(60.1.1.1)

Pfam Families

SPOC domain

ClanCL0616SPOC

External Links

AlphaFold DB: F4JXV3 UniProt: F4JXV3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 541-690